DaliLite: Structural Neighbours

Query: 1NKQC MOLECULE: HYPOTHETICAL 28.8 KDA PROTEIN IN PSD1-SKO1

The output is truncated at max 100 structural neighbours. Matches are sorted by Z-score. Similarities with a Z-score lower than 2 are spurious.
Summary

Notation:
Chain: PDB entry code plus chain identifier
Z: normalized Z-score that depends on the size of the structures. The program optimises a weighted sum of similarities of intramolecular distances.
rmsd: root-mean-square deviation of C-alpha atoms in the least-squares superimposition of the structurally equivalent C-alpha atoms. The program does not optimise rmsd, this is only reported for your information.
lali: number of structurally equivalent residues
nres: number of amino acids in the protein
%id: percentage of identical amino acids over all structurally equivalent residues
Description: the COMPND record from the PDB entry
  No:  Chain   Z    rmsd lali nres  %id  Description
   1:  1NKQ-A 44.2  0.4  245   247  100   HYPOTHETICAL 28.8 KDA PROTEIN IN PSD1-SKO1                 "         
   2:  2DFU-A 25.8  2.0  200   251   33   PROBABLE 2-HYDROXYHEPTA-2,4-DIENE-1,7-DIOATE               "         
   3:  1NR9-A 25.7  1.9  197   211   35   PROTEIN YCGM;                                              "         
   4:  1GTT-A 22.1  2.9  192   421   27   4-HYDROXYPHENYLACETATE DEGRADATION BIFUNCTIONAL            "         
   5:  1QCO-A 18.8  2.7  207   416   19   FUMARYLACETOACETATE HYDROLASE;                             "         
   6:  1SV6-A 15.7  3.0  187   261   20   2-KETO-4-PENTENOATE HYDRATASE;                             "         
   7:  2EB4-A 15.6  3.1  188   261   18   2-OXO-HEPT-3-ENE-1,7-DIOATE HYDRATASE;                     "         
   8:  2PN5-A  3.0  4.7   84  1283    5   THIOESTER-CONTAINING PROTEIN I;                            "         
   9:  1I8L-A  3.0  3.3   78   199    5   T LYMPHOCYTE ACTIVATION ANTIGEN CD80;                      "         
  10:  2ICC-A  2.7  2.7   74   119   14   V-SET AND IMMUNOGLOBULIN DOMAIN-CONTAINING                 "         
  11:  2IF7-A  2.6  6.2   80   188    3   SLAM FAMILY MEMBER 6;                                      "         
  12:  2DRU-A  2.5  3.1   74   180    8   CHIMERA OF CD48 ANTIGEN AND T-CELL SURFACE                 "         
  13:  2GJ7-E  2.4  3.2   80   171    9   IG GAMMA-1 CHAIN C REGION;                                 "         
  14:  1JMA-A  2.4  4.0   96   259    7   HERPESVIRUS ENTRY MEDIATOR;                                "         
  15:  1CN4-A  2.4  3.4   84   217    2   PROTEIN (ERYTHROPOIETIN RECEPTOR);                         "         
  16:  1PEW-A  2.1  2.9   68   108    7   JTO2, A LAMBDA-6 TYPE IMMUNOGLOBULIN LIGHT CHAIN,          "         
  17:  1BD9-A  2.1  3.4   81   180    6   PHOSPHATIDYLETHANOLAMINE BINDING PROTEIN;                  "         
-

No 1: 1NKQA  MOLECULE: HYPOTHETICAL 28.8 KDA PROTEIN IN PSD1-SKO1                 

DSSP  LLHHHHHLLLEEEELLLLLLLHHHL..LLLEEEELHHHEELLLLLLLLLLLLLLLLLLLL
Query SYNYLKAARKIICIGRNYAAHIKEL..QPFFFLKPTSSIVTPLSSSPANSTFNGLNEDGT   58
ident |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||
Sbjct SYNYLKAARKIICIGRNYAAHIKELnnQPFFFLKPTSSIVTPLSSSPANSTFNGLNEDGT   60
DSSP  LLHHHHHLLLEEEELLLLLLLHHHHhlLLLEEEELHHHEELLLLLLLLLLLLLLLLLLLL


DSSP  LLLLEEELLLLLEEELEEEEEEELLLLLLLLLLLHHHHHHLEEEEEEEELLEEHHHHHHH
Query NPGPIFIPRGVKVHHEIELALIVSKHLSNVTKXKPEEVYDSISGVALALDLTARNVQDEA  118
ident ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct NPGPIFIPRGVKVHHEIELALIVSKHLSNVTKXKPEEVYDSISGVALALDLTARNVQDEA  120
DSSP  LLLLEEELLLLLEEELEEEEEEELLLLLLLLLLLHHHLHHHEEEEEEEELLEEHHHHHHH


DSSP  HLLLLLLHHHHHLLLLEELLLLEEHHHHHHHLLLHHHHEEEEEEELLEEEEEEEHHHLLL
Query KKKGLPWTISKGFDTFXPISAIVSREKFSSYKSNLQDIFRVKCSVNGQLRQDGGTNLXLH  178
ident ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct KKKGLPWTISKGFDTFXPISAIVSREKFSSYKSNLQDIFRVKCSVNGQLRQDGGTNLXLH  180
DSSP  HHHLLLLHHHHHLLLLEELLLLEEHHHHHHHLLLLLLLEEEEEEELLEEEEEEEHHHLLL


DSSP  LHHHHHHHHHLLLLLLLLLEEELLLLLLLEEELLLLEEEEEEEELLEEEEEEEEEEEELL
Query PLHKILQHISTXISLEPGDIILTGTPAGVGELKPGDRVHCELLQNNDNIVDXNFECENRP  238
ident ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct PLHKILQHISTXISLEPGDIILTGTPAGVGELKPGDRVHCELLQNNDNIVDXNFECENRP  240
DSSP  LHHHHHHHHHLLLLLLLLLEEELLLLLLLEEELLLLEEEEEEEELLEEEEEEEEEEEELL


DSSP  LLLLLLL
Query GPYEFRE  245
ident |||||||
Sbjct GPYEFRE  247
DSSP  LLLLLLL


No 2: 2DFUA  MOLECULE: PROBABLE 2-HYDROXYHEPTA-2,4-DIENE-1,7-DIOATE               

DSSP  ..LLHH.....................................HHHLLLEEEELLLLLll
Query ..SYNY.....................................LKAARKIICIGRNYAah   21
ident                                                 || | ||||   
Sbjct mkILRFnegrwgvlegelvletdgpggnptgrrydlasvtllpPATPTKIVCVGRNYR..   58
DSSP  leEEEEllleeeeeelleeeeelllllleeeeeeehhhlleelLLLLLLEEEELLLLL..


DSSP  hhhlLLLEEEELHHHEELLLLLLlllllllllllllllLLLEEELLLL.LEEELEEEEEE
Query ikelQPFFFLKPTSSIVTPLSSSpanstfnglnedgtnPGPIFIPRGV.KVHHEIELALI   80
ident      |  |||       |                     |   |      | | |||  
Sbjct .lpkEPGLFLKGPNALARPGNPR..........dpwgtAEPVPYPFFTeELHYEGELAVV  107
DSSP  .lllLLLEEEELHHHEELLLLLL..........lhhhhLLLEEELLLLlLEELLEEEEEE


DSSP  ELLLLLLlLLLLhhHHHHLEEEEEEEELLEEHHHHHHHhlllLLLHHHHHLLLLEELL.L
Query VSKHLSNvTKXKpeEVYDSISGVALALDLTARNVQDEAkkkgLPWTISKGFDTFXPIS.A  139
ident |                |   |   | | ||| ||       | |   |  | | |    
Sbjct VGDRMRH.VPPE..KALDHVLGYTVAVDITARDVQKKD....LQWVRAKSADKFLPLGpW  160
DSSP  ELLLLLL.LLHH..HHHHHEEEEEEEELLEEHHHHHHL....LLLHHHHLLLLLEEEEeE


DSSP  LEEHhhhhhhlllHHHHEEEEEEELLEEEEEEEHHHLLLLHHHHHHHHHLLLLLLLLLEE
Query IVSRekfssyksnLQDIFRVKCSVNGQLRQDGGTNLXLHPLHKILQHISTXISLEPGDII  199
ident                    |   ||| ||| | |         ||  |||   ||| |  
Sbjct LETD........lNPQDTWVRTYVNGTLRQEGHTSQMIFSVAEILSYISTFMTLEPLDVV  212
DSSP  EELL........lLLLLLEEEEEELLEEEEEEEHHHLLLLHHHHHHHHHLLLLLLLLLEE


DSSP  ELLLLLLLEEELLLLEEEEEEEElleeEEEEEEEEEELLLLLllll
Query LTGTPAGVGELKPGDRVHCELLQnndnIVDXNFECENRPGPYefre  245
ident ||||| ||| | ||||                              
Sbjct LTGTPEGVGALRPGDRLEVAVEG....VGTLFTLIGPKEERP...w  251
DSSP  ELLLLLLLLLLLLLLEEEEEELL....LEEEEEEEEEELLLL...l


No 3: 1NR9A  MOLECULE: PROTEIN YCGM;                                              

DSSP  .........LLHHhHHLLLEEEELLLLLllhhhlLLLEEEELHHHEELLLllllllllll
Query .........SYNYlKAARKIICIGRNYAahikelQPFFFLKPTSSIVTPLssspanstfn   51
ident                   |  | | |||       |  | ||                  
Sbjct hxyqhhnwqGALLdYPVSKVVCVGSNYA....peEPVLFIKPETALCDLR..........   46
DSSP  lllllllllLLLLlLLLLLEEEELLLLL....llLLLEEEELHHHEEELL..........


DSSP  lllllllllLLEEELLL.LLEEELEEEEEEELLLLLLlLLLLhhHHHHLEEEEEEEELLE
Query glnedgtnpGPIFIPRG.VKVHHEIELALIVSKHLSNvTKXKpeEVYDSISGVALALDLT  110
ident           |  ||     |||| |||      |          |   | |   |||||
Sbjct .........QPLAIPSDfGSVHHEVELAVLIGATLRQ.ATEE..HVRKAIAGYGVALDLT   94
DSSP  .........LLLLLLLLlLLEEELEEEEEEELLLLLL.LLHH..HHHHHEEEEEEEELLL


DSSP  EHHHHHHHHLLLLLLHHHHHLLLLEELLLLEEHHHHHhhllLHHHhEEEEEEELLEEEEE
Query ARNVQDEAKKKGLPWTISKGFDTFXPISAIVSREKFSsyksNLQDiFRVKCSVNGQLRQD  170
ident  | ||   || | ||   | ||   | |       |       |       ||||  || 
Sbjct LRDVQGKXKKAGQPWEKAKAFDNSCPLSGFIPAAEFT...gDPQN.TTLSLSVNGEQRQQ  150
DSSP  LHHHHHHHHHHLLLLHHHHLLLLLEEELLLEEHHHLL...lLHHH.LEEEEEELLEEEEE


DSSP  EEHHHLLLLHHHHHHHHHLLLLLLLLLEEELLLLLLLEEELLLLEEEEEEEelleeEEEE
Query GGTNLXLHPLHKILQHISTXISLEPGDIILTGTPAGVGELKPGDRVHCELLqnndnIVDX  230
ident | |  | |         |    |  ||  ||||| ||| |  ||                
Sbjct GTTADXIHKIVPLIAYXSKFFTLKAGDVVLTGTPDGVGPLQSGDELTVTFD.....GHSL  205
DSSP  EEHHHLLLLHHHHHHHHLLLLLLLLLLEEELLLLLLLEEELLLLEEEEEEL.....LEEE


DSSP  EEEEEElllllllll
Query NFECENrpgpyefre  245
ident                
Sbjct TTRVLG.........  211
DSSP  EEELLL.........


No 4: 1GTTA  MOLECULE: 4-HYDROXYPHENYLACETATE DEGRADATION BIFUNCTIONAL            

DSSP  llhhhhhLLLEEEELLLLLL..LHHH............lLLLEEEELHHHEELLLlllll
Query synylkaARKIICIGRNYAA..HIKE............lQPFFFLKPTSSIVTPLssspa   46
ident           |     |                          | ||             
Sbjct ......mKGTIFAVALNHRSqlDAWQeafqqspykappkTAVWFIKPRNTVIGCG.....   49
DSSP  ......lLLLEEEEELLLHHhhHHHLlhhhlllllllllLLEEEEELHHHEELLL.....


DSSP  llllllllllllllLLEEELLLLLEEELEEEEEEELLLLLLLLLLlhhHHHHLEEEEEEE
Query nstfnglnedgtnpGPIFIPRGVKVHHEIELALIVSKHLSNVTKXkpeEVYDSISGVALA  106
ident                ||  | | ||      |||| |    |           | | |||
Sbjct ..............EPIPFPQGEKVLSGATVALIVGKTATKVREE...DAAEYIAGYALA   92
DSSP  ..............LLEEELLLLLEELLEEEEEEELLLLLLLLHH...HHHHHEEEEEEE


DSSP  ELLEEHhhHHHHHlllLLLHHHHHLLLLEELLLLEEHHhhhhhlllHHHHEEEEEEELLE
Query LDLTARnvQDEAKkkgLPWTISKGFDTFXPISAIVSREkfssyksnLQDIFRVKCSVNGQ  166
ident  |               |    |  | | ||   |             |        || 
Sbjct NDVSLP..EESFY...RPAIKAKCRDGFCPIGETVALS........NVDNLTIYTEINGR  139
DSSP  ELLLLL..LLLLL...LLLHHHHLLLLLEELLLLLLLL........LLLLLEEEEEELLE


DSSP  EEEEEEHHHLLLLHHHHHHHHHLLLLLLLLLEEELLLLLLLEEELLLLEEEEEEEelleE
Query LRQDGGTNLXLHPLHKILQHISTXISLEPGDIILTGTPAGVGELKPGDRVHCELLqnndN  226
ident       |          |   |    | ||| || |||    |  |||||          
Sbjct PADHWNTADLQRNAAQLLSALSEFATLNPGDAILLGTPQARVEIQPGDRVRVLAE....G  195
DSSP  EEEEEEHHHLLLLHHHHHHHHHLLLLLLLLLEEELLLLLLLLEELLLLEEEEEEL....L


DSSP  EEEEEEEEEELLL...............................................
Query IVDXNFECENRPG...............................................  239
ident                                                             
Sbjct FPPLENPVVDEREvttrksfptlphphgtlfalglnyadhpeeplvflkapntltgdnqt  255
DSSP  LLLEEEEEEEHHHlllllllllllllllleeeelllllllllllleeeelhhheelllee


DSSP  ............................................................
Query ............................................................  239
ident                                                             
Sbjct svrpnnieymhyeaelvvvigkqarnvseadamdyvagytvcndyairdylenyyrpnlr  315
DSSP  eeelllllleelleeeeeeelllllllllllhhhheeeeeeeelleehhhllllllllhh


DSSP  ............................................................
Query ............................................................  239
ident                                                             
Sbjct vksrdgltpmlstivpkeaipdphnltlrtfvngelrqqgttadlifsvpfliaylsefm  375
DSSP  hhllllleellllleehhhllllllleeeeeelleeeeeeehhhllllhhhhhhhhhlll


DSSP  ........................................llllll
Query ........................................pyefre  245
ident                                               
Sbjct tlnpgdmiatgtpkglsdvvpgdevvvevegvgrlvnrivseetak  421
DSSP  lllllleeelllllllllllllleeeeeellleeeeeeeeehhhhl


No 5: 1QCOA  MOLECULE: FUMARYLACETOACETATE HYDROLASE;                             

DSSP  ..................LLHH......................................
Query ..................SYNY......................................    4
ident                                                             
Sbjct msfipvaedsdfpiqnlpYGVFstqsnpkprigvaigdqildlsvikhlftgpalskhqh   60
DSSP  llllllllllllllllllEEEEellllllleeeeeelleeeellllhhhlllllllllhh


DSSP  .........................................................HHH
Query .........................................................LKA    7
ident                                                             
Sbjct vfdettlnnfmglgqaawkearaslqnllsasqarlrddkelrqraftsqasatmhlPAT  120
DSSP  hhhllllhhhhhllhhhhhhhhhhhhhhhlllllhhhhlhhhhhhheeehhhleeelLLL


DSSP  LLLEEEELlLLLL.................lhhhlLLLEEEELHHHEELLLlllllllll
Query ARKIICIGrNYAA.................hikelQPFFFLKPTSSIVTPLssspanstf   50
ident                                     |       ||||            
Sbjct IGDYTDFY.SSRQhatnvgimfrgkenallpnwlhLPVGYHGRASSIVVSG.........  170
DSSP  LLLEEEEL.LLHHhhhhhhhhhllhhhllllllllLLLEEELLLLLEEELL.........


DSSP  llllllllllLLEEELL...............LLLEEELEEEEEEELLLLL..LLLLLLh
Query nglnedgtnpGPIFIPR...............GVKVHHEIELALIVSKHLS..NVTKXKp   93
ident            ||  |                      | | |  |              
Sbjct ..........TPIRRPMgqmrpdnskppvygaCRLLDMELEMAFFVGPGNRfgEPIPIS.  219
DSSP  ..........LLEELLEeeelllllllleeeeLLLEELLEEEEEEELLLLLllLLLLHH.


DSSP  hHHHHLEEEEEEEELLEEHHHHHHHHlLLLLLHHHHHLllLEELL.LLEEHHHHHHHLLL
Query eEVYDSISGVALALDLTARNVQDEAKkKGLPWTISKGFdtFXPIS.AIVSREKFSSYKSN  152
ident       | |  |  |  ||  |       |     | |     ||   |           
Sbjct .KAHEHIFGMVLMNDWSARDIQQWEY.VPLGPFLGKSF..GTTISpWVVPMDALMPFVVP  275
DSSP  .HHHHHEEEEEEEELLEEHHHHHHHL.LLLLLLHHHHL..LEEELlLLEEHHHHHHHEEL


DSSP  .................HHHHEEEEEEEL......LEEEEEEEHHHLLLLHHHHHHHHHL
Query .................LQDIFRVKCSVN......GQLRQDGGTNLXLHPLHKILQHIST  189
ident                           |                           | | | 
Sbjct npkqdpkplpylchsqpYTFDINLSVSLKgegmsqAATICRSNFKHMYWTMLQQLTHHSV  335
DSSP  lllllllllhhhlllllLEELLEEEEEEEllllllLEEEEEEEHHHLLLLHHHHHHHHHL


DSSP  L.LLLLLLLEEELLLL.......LLLE....................EELLLLEEEEEEE
Query X.ISLEPGDIILTGTP.......AGVG....................ELKPGDRVHCELL  221
ident     | |||    ||         |                       |  || |     
Sbjct NgCNLRPGDLLASGTIsgsdpesFGSMlelswkgtkaidvgqgqtrtFLLDGDEVIITGH  395
DSSP  LlLLLLLLLEEELLLLllllhhhLLLHhhhllllllleellllleelLLLLLLEEEEEEE


DSSP  EL...lEEEEEE.EEEEEELLlllllll
Query QN...nDNIVDX.NFECENRPgpyefre  245
ident                             
Sbjct CQgdgyRVGFGQcAGKVLPAL.......  416
DSSP  EEllllEEELLLeEEEEELLL.......


No 6: 1SV6A  MOLECULE: 2-KETO-4-PENTENOATE HYDRATASE;                             

DSSP  ...............................................llhhhhhlLLEEE
Query ...............................................synylkaaRKIIC   13
ident                                                             
Sbjct mtkhtleqlaadlrraaeqgeaiaplrdligidnaeaayaiqhinvqhdvaqgrrVVGRK   60
DSSP  llllhhhhhhhhhhhhhhhlllllllhhhhllllhhhhhhhhhhhhhhhhlllllEEEEE


DSSP  ELLLLLL...lhhhlLLLEEEELHHHEELLLlllllllllllllllllllLLEEELLLLL
Query IGRNYAA...hikelQPFFFLKPTSSIVTPLssspanstfnglnedgtnpGPIFIPRGVK   70
ident  |             || |                                 |   |   
Sbjct VGLTHPKvqqqlgvdQPDFGTLFADMCYGDN...................EIIPFSRVLQ  101
DSSP  EELLLHHhhhlllllLLEEEEEEHHHEEELL...................EEELLLLLLL


DSSP  EEELEEEEEEELLLLLlLLLLLHHHHHHLEEEEEEEELLEEHHH.hHHHHllLLLL...H
Query VHHEIELALIVSKHLSnVTKXKPEEVYDSISGVALALDLTARNV.qDEAKkkGLPW...T  126
ident    | | ||     |   |     | |  |  |  ||                       
Sbjct PRIEAEIALVLNRDLP.ATDITFDELYNAIEWVLPALEVVGSRIrdWSIQ..FVDTvadN  158
DSSP  LEEEEEEEEEELLLLL.LLLLLHHHHHLLEEEEEEEEEEELLLLllLLLL..HHHHhhlH


DSSP  HHHHlllLEELL.LLEEHHHHhhhlllHHHHEEEEEEELLEEEEEEEHHHLLLL....HH
Query ISKGfdtFXPIS.AIVSREKFssyksnLQDIFRVKCSVNGQLRQDGGTNLXLHP....LH  181
ident  | |      |                       |   |      |     |        
Sbjct ASCG...VYVIGgPAQRPAGL......DLKNCAMKMTRNNEEVSSGRGSECLGHplnaAV  209
DSSP  HHEE...EEEELlLLLLLLLL......LLLLLEEEEEELLEEEEEEEHHHLLLLhhhhHH


DSSP  HHHHHHHLL.LLLLLLLEEELLLLLLLEEELLLLEEEEEEEElleeEEEEEEEEEEllll
Query KILQHISTX.ISLEPGDIILTGTPAGVGELKPGDRVHCELLQnndnIVDXNFECENrpgp  240
ident             |  |||||||          |||           |             
Sbjct WLARKMASLgEPLRTGDIILTGALGPMVAVNAGDRFEAHIEG....IGSVAATFSS....  261
DSSP  HHHHHHHHLlLLLLLLLEEEEEELLLLEELLLLLEEEEEELL....LEEEEEEELL....


DSSP  lllll
Query yefre  245
ident      
Sbjct .....  261
DSSP  .....


No 7: 2EB4A  MOLECULE: 2-OXO-HEPT-3-ENE-1,7-DIOATE HYDRATASE;                     

DSSP  ................................................llhhhhhlLLEE
Query ................................................synylkaaRKII   12
ident                                                          |  
Sbjct mfdkhthtliaqrldqaekqreqiraisldypeitiedayavqrewvrlkiaegrtLKGH   60
DSSP  lllhhhhhhhhhhhhhhhhhllllllhhhhlllllhhhhhhhhhhhhhhhhhllllEEEE


DSSP  EELLLLL.lLHHH..lLLLEEEELHHHEELLLlllllllllllllllllllLLEEELLLL
Query CIGRNYA.aHIKE..lQPFFFLKPTSSIVTPLssspanstfnglnedgtnpGPIFIPRGV   69
ident  ||              |                                   |   |  
Sbjct KIGLTSKamQASSqisEPDYGALLDDMFFHDG...................SDIPTDRFI  101
DSSP  EEELHHHhhLLLLlllLLEEEEEEHHHEELLL...................EEELHHHLL


DSSP  LEEELEEEEEEELLLLLLLLLLlHHHHHHLEEEEEEEELLEEhhHHHHhHLLLL.....l
Query KVHHEIELALIVSKHLSNVTKXkPEEVYDSISGVALALDLTArnVQDEaKKKGL.....p  124
ident     | |||    | |          ||     |  || |                    
Sbjct VPRIEVELAFVLAKPLRGPNCT.LFDVYNATDYVIPALELID..ARCH.NIPRKvfdtis  157
DSSP  LLEEEEEEEEEELLLLLLLLLL.HHHHHHHEEEEEEEEEEEL..LLLL.LLLLHhhhhhh


DSSP  LHHHHHlllLEELL.LLEEHHHHhhhlllHHHHEEEEEEELLEEEEEEEHHHLLLLHHHH
Query WTISKGfdtFXPIS.AIVSREKFssyksnLQDIFRVKCSVNGQLRQDGGTNLXLHPLHKI  183
ident                                         ||     |     |      
Sbjct DNAANA...GVILGgRPIKPDEL......DLRWISALMYRNGVIEETGVAAGVLNHPANG  208
DSSP  LHHHEE...EEEELlLLLLLLLL......LHHHLEEEEEELLEEEEEEEHHHLLLLLLHH


DSSP  HHHHHLLL.....LLLLLLEEELLLLLLLEEELLLLEEEEEEEelleEEEEEEEEEEell
Query LQHISTXI.....SLEPGDIILTGTPAGVGELKPGDRVHCELLqnndNIVDXNFECEnrp  238
ident               || | ||| |          ||  |        |            
Sbjct VAWLANKLapydvQLEAGQIILGGSFTRPVPARKGDTFHVDYG....NMGSISCRFV...  261
DSSP  HHHHHHHHhhhllLLLLLLEEELLLLLLLEELLLLLEEEEELH....HHLEEEEEEL...


DSSP  lllllll
Query gpyefre  245
ident        
Sbjct .......  261
DSSP  .......


No 8: 2PN5A  MOLECULE: THIOESTER-CONTAINING PROTEIN I;                            

DSSP  ..........................................llhhhhhllleeeellll
Query ..........................................synylkaarkiicigrny   18
ident                                                             
Sbjct llvvgpkfiranqeytlvisnfnsqlskvdlllklelsvlnvtkmvdvrrnmnrminfnm   60
DSSP  leeeeeleelllleeeeeeeelllllleeeeeeeelllllleeeeeeeelleeeeeeeel


DSSP  lllhhhlllleeeelhhheellllllllllllllllllllllLLEEEllllLEEELEEEE
Query aahikelqpffflkptssivtplssspanstfnglnedgtnpGPIFIprgvKVHHEIELA   78
ident                                                             
Sbjct pedltagnykitidgqrgfsfhkeaelvylsksisgliqvdkPVFKP....GDTVNFRVI  116
DSSP  lllllllleeeeeeeellllleeeeeeeelllleeeeeeellLEELL....LLEEEEEEE


DSSP  EeelllllllllllhhhhhHLEEEeeeeelleehhhhhhhhllllllhhhhhlllleell
Query LivskhlsnvtkxkpeevyDSISGvalaldltarnvqdeakkkglpwtiskgfdtfxpis  138
ident                                                             
Sbjct V................ldTELKP....................................  124
DSSP  E................eeLLLLL....................................


DSSP  lleehhhhhhhLLLHHHhEEEEEEEL.LEEEEE.EEHHhllllhhhhhhhhhllllllll
Query aivsrekfssyKSNLQDiFRVKCSVN.GQLRQD.GGTNlxlhplhkilqhistxislepg  196
ident                     |                                       
Sbjct ...........PARVKS.VYVTIRDPqRNVIRKwSTAK.....................l  151
DSSP  ...........LLLLLE.EEEEEELLlLLEEEEeEEEE.....................l


DSSP  leeELLLllllEEEL...lLLEEEEEEEELLEEEEEEEEEEEELLLL.............
Query diiLTGTpagvGELK...pGDRVHCELLQNNDNIVDXNFECENRPGP.............  240
ident                                   |   ||                    
Sbjct yagVFES...dLQIAptpmLGVWNISVEVEGEELVSKTFEVKEYVLStfdvqvmpsvipl  208
DSSP  lllEEEE...eEELLllllLEEEEEEEEELLEEEEEEEEEELLLLLLleeeeeeelllll


DSSP  ............................................................
Query ............................................................  240
ident                                                             
Sbjct eehqavnltieanyhfgkpvqgvakvelyldddklklkkeltvygkgqvelrfdnfamda  268
DSSP  hhhleeeeeeeeeelllllleeeeeeeeeelllleeeeeeeeeeleeeeeeellllllll


DSSP  ............................................................
Query ............................................................  240
ident                                                             
Sbjct dqqdvpvkvsfveqytnrtvvkqsqitvyryayrvelikespqfrpglpfkcalqfthhd  328
DSSP  leeeeeeeeeeeellllleeeeeeeeeeelllleeeeeelllllllllleeeeeeeelll


DSSP  ............................................................
Query ............................................................  240
ident                                                             
Sbjct gtpakgisgkvevsdvrfettttsdndgliklelqpsegteqlsihfnavdgfffyedvn  388
DSSP  llllllleeeeeehhhleeeeeellllleeeeeellllllleeeeeeellllleeeeeee


DSSP  ............................................................
Query ............................................................  240
ident                                                             
Sbjct kvetvtdayiklelkspikrnklmrfmvtctermtffvyyvmskgniidagfmrpnkqpk  448
DSSP  llllllllleeeeelllllllleeeeeeeeeeeelleeeeeelllleeeeeeelllleee


DSSP  ............................................................
Query ............................................................  240
ident                                                             
Sbjct yllqlnatekmiprakiliatvagrtvvydfadlafqelrnnfdlsideqeikpgrqiel  508
DSSP  eeeeeellhhhlleeeeeeeeeelleeeeeeeeeelhhhlllleeeellllllllleeee


DSSP  ............................................................
Query ............................................................  240
ident                                                             
Sbjct smsgrpgayvglaaydkalllfnknhdlfwedigqvfdgfhenefdifhslglfartldd  568
DSSP  eeellllleeeeeeeehhhhhhllllllhhhhhhhhhlllllllllhhhhhleeeeelll


DSSP  ............................................................
Query ............................................................  240
ident                                                             
Sbjct ilfdsqeswlwknvsigrsgsrklievvpdtttswyltgfsidpvyglgiikkpiqfttv  628
DSSP  leellllllllleeellllleeeeeeellllleeeeeeeeeeellleeeelllleeeeel


DSSP  ............................................................
Query ............................................................  240
ident                                                             
Sbjct qpfyivenlpysikrgeavvlqftlfnnlgaeyiadvtlynvanqtefvgrpntdlsytk  688
DSSP  lleeeeeellleeellleeeeeeeeeellllleeeeeeeelhhhleeelllllllleeee


DSSP  ............................................................
Query ............................................................  240
ident                                                             
Sbjct svsvppkvgvpisflikarklgemavrvkasimlghetdalekvirvmpeslvqprmdtr  748
DSSP  eeeellllleeeeeeeeellleeeeeeeeeelllllleeeeeeeeeeellllllleeeee


DSSP  ............................................................
Query ............................................................  240
ident                                                             
Sbjct ffcfddhknqtfpinldinkkadsgstkiefrlnpnllttviknldhllgvptgcgeqnm  808
DSSP  eeeeeeeeeeeeeeelllllllllllleeeeeeellllhhhhhllllllllllllllhhh


DSSP  ............................................................
Query ............................................................  240
ident                                                             
Sbjct vkfvpnilvldylhaigskeqhlidkatnllrqgyqnqmryrqtdgsfglwettngsvfl  868
DSSP  hhlhhhhhhhhhhhhlllllhhhhhhhhhhhhhhhhhhhhhllllllllllllllllhhh


DSSP  ............................................................
Query ............................................................  240
ident                                                             
Sbjct tafvgtsmqtavkyisdidaamvekaldwlaskqhfsgrfdkagaeyhkemqgglrngva  928
DSSP  hhhhhhhhhhhllllllllhhhhhhhhhhhhhllllllllllllllllhhhhllllllhh


DSSP  ............................................................
Query ............................................................  240
ident                                                             
Sbjct ltsyvlmallendiakakhaeviqkgmtylsnqfgsinnaydlsiatyammlnghtmkee  988
DSSP  hhhhhhhhhhllhhhhhhlhhhhhhhhhhhhhhhhhlllhhhhhhhhhhhhhhllllhhh


DSSP  ............................................................
Query ............................................................  240
ident                                                             
Sbjct alnklidmsfidadknerfwnttnpiettayallsfvmaekytdgipvmnwlvnqryvtg 1048
DSSP  hhhhhhhlleeelllleeelllllhhhhhhhhhhhhhhlllhhhhhhhhhhhhlllllll


DSSP  ............................................................
Query ............................................................  240
ident                                                             
Sbjct sfpstqdtfvglkaltkmaekispsrndytvqlkykksakyfkinseqidvenfvdiped 1108
DSSP  llllhhhhhhhhhhhhhhhhhhllllleeeeeeeelleeeeeeelllllllllleellll


DSSP  ............................................................
Query ............................................................  240
ident                                                             
Sbjct tkkleinvggigfgllevvyqfnlnlvnfenrfqldlekqntgsdyelrlkvcasyipql 1168
DSSP  lleeeeeeeeeeeeeeeeeeellllllleeeleeeeeeeelllllleeeeeeeeeellll


DSSP  .....................................lLLLL..................
Query .....................................yEFRE..................  245
ident                                                             
Sbjct tdrrsnmalievtlpsgyvvdrnpiseqtkvnpiqkteIRYGgtsvvlyydnmgserncf 1228
DSSP  llllllleeeeeelllleeeeeeeeellllllllleeeEELLlleeeeeellllllleee


DSSP  .......................................................
Query .......................................................  245
ident                                                        
Sbjct tltayrrfkvalkrpayvvvydyyntnlnaikvyevdkqnlceicdeedcpaecg 1283
DSSP  eeeeeellleelllleeeeeeelleeeeeeeeeellllllhhhhlllllllllll


No 9: 1I8LA  MOLECULE: T LYMPHOCYTE ACTIVATION ANTIGEN CD80;                      

DSSP  llhhhhhllleeeelllllllhhhlllleeeelhhheellllllllllllllllllllll
Query synylkaarkiicigrnyaahikelqpffflkptssivtplssspanstfnglnedgtnp   60
ident                                                             
Sbjct ...........................................................v    1
DSSP  ...........................................................l


DSSP  LLEEELLLLLeeeleeeeeeelllllllllllhhhhhhleeeeeeeelleehhhhhhhhl
Query GPIFIPRGVKvhheielalivskhlsnvtkxkpeevydsisgvalaldltarnvqdeakk  120
ident                                                             
Sbjct IHVTKEVKEV..................................................   11
DSSP  EEEEEELLLL..................................................


DSSP  lllllhhhhhlllLEEL.LLLEehhhhhhhllLHHHHEEEEEEELLEEEEEEEHHHllll
Query kglpwtiskgfdtFXPI.SAIVsrekfssyksNLQDIFRVKCSVNGQLRQDGGTNLxlhp  179
ident                      |                |                     
Sbjct .............ATLScGHNV........svEELAQTRIYWQKEKKMVLTMMSGD....   46
DSSP  .............EEELlLLLL........lhHHHLLEEEEEEELLEEEEEEELLE....


DSSP  hhhhhhhhhllllllllleeellLLLLLE....................eeLLLLEEEEE
Query lhkilqhistxislepgdiiltgTPAGVG....................elKPGDRVHCE  219
ident                                                           | 
Sbjct .......................MNIWPEyknrtifditnnlsivilalrpSDEGTYECV   83
DSSP  .......................EEELLLlllleeeellllleeeellllhHHLEEEEEE


DSSP  EEEL....LEEEEEEEEEEEELLLL...................................
Query LLQN....NDNIVDXNFECENRPGP...................................  240
ident  |                                                          
Sbjct VLKYekdaFKREHLAEVTLSVKADFptpsisdfeiptsnirriicstsggfpephlswle  143
DSSP  EEEEelleEEEEEEEEEEEEEELLLllleeeeeellllleeeeeeeeeeellleeeeeel


DSSP  ...................................................lllll
Query ...................................................yefre  245
ident                                                         
Sbjct ngeelnainttvsqdpetelyavsskldfnmttnhsfmclikyghlrvnqtfnwnt  199
DSSP  llllllllleeeeelllllleeeeeeeeeellllleeeeeeeelleeelleeelll


No 10: 2ICCA  MOLECULE: V-SET AND IMMUNOGLOBULIN DOMAIN-CONTAINING                 

DSSP  llhhhhhllleeeelllllllhhhlllleeeelhhheelllllllllllllllllllllL
Query synylkaarkiicigrnyaahikelqpffflkptssivtplssspanstfnglnedgtnP   60
ident                                                            |
Sbjct ....................................................grpilevP    8
DSSP  ....................................................lllllllL


DSSP  LLEEELLLLLeeeleeeeeeelllllllllllhhhhhhleeeeeeeelleehhhhhhhhl
Query GPIFIPRGVKvhheielalivskhlsnvtkxkpeevydsisgvalaldltarnvqdeakk  120
ident      |                                                      
Sbjct ESVTGPWKGD..................................................   18
DSSP  LEEEEELLLL..................................................


DSSP  lllllhhhhhlllLEELLLLEEHHHhhhhlllhhhhEEEEEEEL....LEEEEEEeHHHL
Query kglpwtiskgfdtFXPISAIVSREKfssyksnlqdiFRVKCSVN....GQLRQDGgTNLX  176
ident                |                      ||  |                 
Sbjct ............vNLPCTYDPLQGY.........tqVLVKWLVQrgsdPVTIFLR.DSSG   56
DSSP  ............eEELLLLLLLLLL.........eeEEEEEEELllllLEEEEEE.ELLE


DSSP  lllhhhhhhhhhllllllllleeelllLLLLE........................eeLL
Query lhplhkilqhistxislepgdiiltgtPAGVG........................elKP  212
ident                                                             
Sbjct ...........................DHIQQakyqgrlhvshkvpgdvslqlstlemDD   89
DSSP  ...........................EEELLhhhllleeellllllllleeellllhHH


DSSP  LLEEEEEEEEL....lEEEEEEEEEEEELLlllllll
Query GDRVHCELLQN....nDNIVDXNFECENRPgpyefre  245
ident      ||             |   |            
Sbjct RSHYTCEVTWQtpdgnQVVRDKITELRVQK.......  119
DSSP  LEEEEEEEEEElllllEEEEEEEEEEEEEL.......


No 11: 2IF7A  MOLECULE: SLAM FAMILY MEMBER 6;                                      

DSSP  llhhhhhllleeeelllllllhhhlllleeeelhhheellllllllllllllllllllll
Query synylkaarkiicigrnyaahikelqpffflkptssivtplssspanstfnglnedgtnp   60
ident                                                             
Sbjct .........................................................ltp    3
DSSP  .........................................................lll


DSSP  LLEEELlllleeeleeeeeeelllllllllllhhhhhhleeeeeeeelleehhhhhhhhl
Query GPIFIPrgvkvhheielalivskhlsnvtkxkpeevydsisgvalaldltarnvqdeakk  120
ident                                                             
Sbjct LMVNGI......................................................    9
DSSP  EEEEEE......................................................


DSSP  lllllhhhhhLLLLEELLLLEEhhhhhhhlllhhhhEEEEEEELLEEEEEEEHhhLLLLh
Query kglpwtiskgFDTFXPISAIVSrekfssyksnlqdiFRVKCSVNGQLRQDGGTnlXLHPl  180
ident                |                           |                
Sbjct ........lgESVTLPLEFPAG...........ekvNFITWLFNETSLAFIVP..HETK.   47
DSSP  ........llLLEEELLLLLLL...........lllLEEEEEELLEEEEEEEL..LLLL.


DSSP  hhhhhhhhllllllllleeeLLLLLLLE....................eeLLLLEEEEEE
Query hkilqhistxislepgdiilTGTPAGVG....................elKPGDRVHCEL  220
ident                                                             
Sbjct ....................SPEIHVTNpkqgkrlnftqsyslqlsnlkmEDTGSYRAQI   87
DSSP  ....................LLEEEELLhhhhlleeellllleeellllhHHLEEEEEEE


DSSP  EELlEEEEEEEEEEEELLLL...........................lLLLL........
Query LQNnDNIVDXNFECENRPGP...........................yEFRE........  245
ident                                                             
Sbjct STK.TSAKLSSYTLRILRQLrniqvtnhsqnmtcelhltcsvedaddnVSFRwealgntl  146
DSSP  ELL.LLEEEEEEEEEEELLLeeeeeeelllllleeeeeeeeeelllllLEEEeeelleee


DSSP  ..........................................
Query ..........................................  245
ident                                           
Sbjct ssqpnltvswdprisseqdytciaenavsnlsfsvsaqklce  188
DSSP  ellleeeeeelllllllleeeeeeeelleeeeeeeehhhhll


No 12: 2DRUA  MOLECULE: CHIMERA OF CD48 ANTIGEN AND T-CELL SURFACE                 

DSSP  llhhhhhllleeeelllllllhhhlllleeeelhhheellllllllllllllllllllll
Query synylkaarkiicigrnyaahikelqpffflkptssivtplssspanstfnglnedgtnp   60
ident                                                             
Sbjct ......................................................fqdqsv    6
DSSP  ......................................................llllll


DSSP  LLEEELLLLLeeeleeeeeeelllllllllllhhhhhhleeeeeeeelleehhhhhhhhl
Query GPIFIPRGVKvhheielalivskhlsnvtkxkpeevydsisgvalaldltarnvqdeakk  120
ident        |                                                    
Sbjct PNVNAITGSN..................................................   16
DSSP  LEEEEELLLL..................................................


DSSP  lllllhhhhhlllLEEL.LLLEehhhhhhhlllhhhHEEEEEEELL.EEEEEEEHHHLll
Query kglpwtiskgfdtFXPI.SAIVsrekfssyksnlqdIFRVKCSVNG.QLRQDGGTNLXlh  178
ident                                       |        |       |    
Sbjct .............VTLTiLKHP...........lasYQRLTWLHTTnQKILEYFPNGK..   50
DSSP  .............EEELlLLLL...........lllLLEEEEELLLlLEEEEELLLLL..


DSSP  lhhhhhhhhhllllllllleeellLLLLLEE....................eLLLLEEEE
Query plhkilqhistxislepgdiiltgTPAGVGE....................lKPGDRVHC  218
ident                                                             
Sbjct ........................KTVFESVfkdrvdldktngalriynvskEDRGDYYM   86
DSSP  ........................EEELLLLlllleeelllllleeellllhHHLEEEEE


DSSP  EEEeLLEEeEEEEEEEEELLLL......................................
Query ELLqNNDNiVDXNFECENRPGP......................................  240
ident   |             |                                           
Sbjct RML.HETE.DQWKITMEVYEMVskpmiywecsnatltcevlegtdvelklyqgkehlrsl  144
DSSP  EEE.LLLE.EEEEEEEEEELLLllleeeeehhhleeeeellllllleeeeeelleeeeee


DSSP  ...............................lllll
Query ...............................yefre  245
ident                                     
Sbjct rqktmsyqwtnlrapfkckavnrvsqesemevvncp  180
DSSP  llleeeeellllllleeeeeeelleeeeeeelllll


No 13: 2GJ7E  MOLECULE: IG GAMMA-1 CHAIN C REGION;                                 

DSSP  llhhhhhllleeeelllllllhhhlllleeeelhhheelllllllllllllllllllllL
Query synylkaarkiicigrnyaahikelqpffflkptssivtplssspanstfnglnedgtnP   60
ident                                                            |
Sbjct ..................................................rgvtvrmetP   10
DSSP  ..................................................lleeeeeelL


DSSP  LLEEELLLLLEeeleeeeeeelllllllllllhhhhhhleeeeeeeelleehhhhhhhhl
Query GPIFIPRGVKVhheielalivskhlsnvtkxkpeevydsisgvalaldltarnvqdeakk  120
ident   |    |                                                    
Sbjct EAILFSPGETF.................................................   21
DSSP  LEEELLLLLLE.................................................


DSSP  lllllhhhhhlllLEELLLLEehhHHHHhLLLHhhHEEEEEEEL................
Query kglpwtiskgfdtFXPISAIVsreKFSSyKSNLqdIFRVKCSVN................  164
ident                  |                    |                     
Sbjct .............STNVSIHA...IAHD.DQTY..SMDVVWLRFdvptscaemriyescl   62
DSSP  .............ELLLEEEE...EELL.LLLE..EEEEEEEEElllllllleeeehhhh


DSSP  .....................lEEEEEEEHHhllllhhhhhhhhhllllllllleeelll
Query .....................gQLRQDGGTNlxlhplhkilqhistxislepgdiiltgt  203
ident                                                             
Sbjct yhpqlpeclspadapcaastwtSRLAVRSYA...............gcsrtnppprcsae  107
DSSP  hllllhhhhllllhhheellllLLLEEEEEE...............eellllllllleee


DSSP  LLLLEE..................eLLLLEEEEEEEELLEEEEEEEEEEEELL....lll
Query PAGVGE..................lKPGDRVHCELLQNNDNIVDXNFECENRP....gpy  241
ident                                 |    |                      
Sbjct AHMEPVpglawqaasvnlefrdaspQHSGLYLCVVYVNDHIHAWGHITISTAAqyrnavv  167
DSSP  EEELLLlleeelllllleeellllhHHLEEEEEEEEELLEEEEEEEEEEELLLlllleee


DSSP  llll
Query efre  245
ident     
Sbjct eqpl  171
DSSP  elll


No 14: 1JMAA  MOLECULE: HERPESVIRUS ENTRY MEDIATOR;                                

DSSP  llhhhhhllleeeelllllllHHHL......................LLLEeeelhhhee
Query synylkaarkiicigrnyaahIKEL......................QPFFflkptssiv   38
ident                                                             
Sbjct ....................kYALAdaslkmadpnrfrgkdlpvldqLTDP.....pgvr   35
DSSP  ....................lLLLLlhhhhlllllllllllllllleELLL.....llle


DSSP  llllllllllllllllllllllLLEEEL.LLLLEeeleeeeeeelllllllllllhhhhh
Query tplssspanstfnglnedgtnpGPIFIP.RGVKVhheielalivskhlsnvtkxkpeevy   97
ident                                  |                          
Sbjct rvyhiqaglpdpfqppslpitvYYAVLErACRSV..........................   69
DSSP  eelllllllllllllllllleeEEEEELlLLLEE..........................


DSSP  hleeeeeeeelleehhhhhhhhllllllhhhhhlllLEELLLL..EEHHHHHH.HLLLHH
Query dsisgvalaldltarnvqdeakkkglpwtiskgfdtFXPISAI..VSREKFSS.YKSNLQ  154
ident                                                    |        
Sbjct ....................................LLNAPSEapQIVRGASEdVRKQPY   93
DSSP  ....................................EELLLLLhhHHHHLLLHhHHLLLE


DSSP  hHEEEEEEEL....LEEEEEEEHHhllllhhhhhhhhhllllllllleeelllLLLLEE.
Query dIFRVKCSVN....GQLRQDGGTNlxlhplhkilqhistxislepgdiiltgtPAGVGE.  209
ident                                                      |      
Sbjct .NLTIAWFRMggncAIPITVMEYT.............ecsynkslgacpirtqPRWNYYd  139
DSSP  .EEEEEEEEEelleEEEEEEEEEE.............eelllllllllleeelLEELLLl


DSSP  ..................ellLLEEEEEEEELLEEeEEEEEEEEELLLLLLLL.......
Query ..................lkpGDRVHCELLQNNDNiVDXNFECENRPGPYEFR.......  244
ident                                |        |  | |              
Sbjct sfsavsednlgflmhapafetAGTYLRLVKINDWT.EITQFILEHRAKGSCKYalplrip  198
DSSP  lleeelllllleeeelllhhhLEEEEEEEEELLEE.EEEEEEEEELLLLLLLLlllllll


DSSP  ............................................................
Query ............................................................  244
ident                                                             
Sbjct psaclspqayqqgvtvdsigmlprfipenqrtvavyslkiagwhgpkapytstllppels  258
DSSP  hhhlllhhhhhlllllllllleelllhhhhhhhhhhhhhlllllllllleelllllhhhh


DSSP  l
Query e  245
ident  
Sbjct e  259
DSSP  l


No 15: 1CN4A  MOLECULE: PROTEIN (ERYTHROPOIETIN RECEPTOR);                         

DSSP  llhhhhhllleeeelllllllhhhllLLEE...EELHhheelllllllllllllllllll
Query synylkaarkiicigrnyaahikelqPFFF...LKPTssivtplssspanstfnglnedg   57
ident                           |                                 
Sbjct ..........................PDPKfesKAAL....................laa   14
DSSP  ..........................LLHHhhhHHHH....................hhl


DSSP  llllleeelllLLEEELeEEEEEElllllllllllhhhhhhleeeeeeeelleehhhhhh
Query tnpgpifiprgVKVHHEiELALIVskhlsnvtkxkpeevydsisgvalaldltarnvqde  117
ident                                                             
Sbjct rgpeellcfteRLEDLV.CFWEEA....................................   37
DSSP  lllllleeellLLLLLE.EEEEEL....................................


DSSP  hhllllllhhhhhlllleelllleehhhhhhhLLLHH.HHEEEEEEEL.LEEEEEEEhhh
Query akkkglpwtiskgfdtfxpisaivsrekfssyKSNLQ.DIFRVKCSVN.GQLRQDGGtnl  175
ident                                                             
Sbjct ...............................aSAGVGpGQYSFSYQLEdEPWKLCRL...   63
DSSP  ...............................lLLLLLlLLEEEEEEELlLLLEEELL...


DSSP  llllhhhHHHHhhllllllllleeELLLLLLL.EEELlLLEEEEEEEEL.LEEEEEEEEE
Query xlhplhkILQHistxislepgdiiLTGTPAGV.GELKpGDRVHCELLQN.NDNIVDXNFE  233
ident                                                             
Sbjct ....hqaPTAR..........gavRFWCSLPTaDTSS.FVPLELRVTAAsGAPRYHRVIH  108
DSSP  ....eeeELLL..........lleEEEEELLHhHLLL.LLLEEEEEEELlLLLLLEEEEL


DSSP  ............................................................
Query ............................................................  233
ident                                                             
Sbjct inevvlldapvglvarladesghvvlrwlpppetpmtshiryevdvsagqgagsvqrvei  168
DSSP  lllleelllleeeelllllllllleeeeelllllllhhheeeeeeeellllllleeeeee


DSSP  ......................eeeLLLL...............lllll
Query ......................cenRPGP...............yefre  245
ident                             |                    
Sbjct legrtecvlsnlrgrtrytfavrarMAEPsfggfwsewsepvslltpsd  217
DSSP  llllleeelllllllleeeeeeeeeELLLllleellllllleeeellll


No 16: 1PEWA  MOLECULE: JTO2, A LAMBDA-6 TYPE IMMUNOGLOBULIN LIGHT CHAIN,          

DSSP  llhhhhhllleeeelllllllhhhlllleeeelhhheellllllllllllllllllllll
Query synylkaarkiicigrnyaahikelqpffflkptssivtplssspanstfnglnedgtnp   60
ident                                                             
Sbjct .....................................................nfmlnqp    7
DSSP  .....................................................llleell


DSSP  LLEEELLLLLEeeleeeeeeelllllllllllhhhhhhleeeeeeeelleehhhhhhhhl
Query GPIFIPRGVKVhheielalivskhlsnvtkxkpeevydsisgvalaldltarnvqdeakk  120
ident        |  |                                                 
Sbjct HSVSESPGKTV.................................................   18
DSSP  LEEEELLLLLE.................................................


DSSP  lllllhhhhhlllLEELLLLEEhhhhhhhlllhhhHEEEEEEEL..LEEEEEEehhhlll
Query kglpwtiskgfdtFXPISAIVSrekfssyksnlqdIFRVKCSVN..GQLRQDGgtnlxlh  178
ident                                       |                     
Sbjct .............TISCTRSSG..........niaSNYVQWYQQsaPITVIYE.......   48
DSSP  .............EEEEEELLL..........lhhHLLLEEEELllLEEEELL.......


DSSP  lhhhhhhhhhllllllllleeellLLLLL........................eeeLLLL
Query plhkilqhistxislepgdiiltgTPAGV........................gelKPGD  214
ident                                                             
Sbjct ........................DNQRPsgvpdrfagsidrssnsasltisglktEDEA   84
DSSP  ........................LLLLLlllllleeeeeelllleeeeeellllhHHLE


DSSP  EEEEEEEELLEeEEEE.EEEEEELLlllllll
Query RVHCELLQNNDnIVDX.NFECENRPgpyefre  245
ident    |         |                  
Sbjct DYYCQSYDARN.VVFGgGTRLTVLG.......  108
DSSP  EEEEEEEELLE.EEELlLEEEEELL.......


No 17: 1BD9A  MOLECULE: PHOSPHATIDYLETHANOLAMINE BINDING PROTEIN;                  

DSSP  llhhhhhllleeeelllllllhhhlllleeeelhHHEELLLlllllllllllllllllll
Query synylkaarkiicigrnyaahikelqpffflkptSSIVTPLssspanstfnglnedgtnp   60
ident                                                             
Sbjct .........lskwsgplslqevdeqpqhplhvtyAGAAVDE.................lg   34
DSSP  .........lhhhhllllhhhlllllleeleeeeLLEEELL.................ll


DSSP  LLEEElllllEEELeeeeeeelllllllllllhhhhhhleeeeeeeelleehhhhhhhhl
Query GPIFIprgvkVHHEielalivskhlsnvtkxkpeevydsisgvalaldltarnvqdeakk  120
ident                                                             
Sbjct KVLTP..tqvKNRP..............................................   46
DSSP  EELLL..hhhLLLL..............................................


DSSP  lllllhhhhhlllleelLLLEEhhhhhhhlllHHHHEEEEEEEL...........LEEEE
Query kglpwtiskgfdtfxpiSAIVSrekfssyksnLQDIFRVKCSVN...........GQLRQ  169
ident                                                             
Sbjct ...............tsISWDG........ldSGKLYTLVLTDPdapsrkdpkyrEWHHF   83
DSSP  ...............leEELLL........llLLLEEEEEEEELlllllllllllLEEEE


DSSP  EEEHhhllllhhhhhhhhhllllllllleeELLLL.LLLEEELL.....LLEEEEEEEEL
Query DGGTnlxlhplhkilqhistxislepgdiiLTGTP.AGVGELKP.....GDRVHCELLQN  223
ident                                 ||         |       |        
Sbjct LVVN....................mkgndiSSGTVlSDYVGSGPpkgtgLHRYVWLVYEQ  123
DSSP  EEEE....................eelllhHHLEEeELLLLLLLlllllLEEEEEEEEEL


DSSP  .................................LEEEEEEEEEEEELL..lllllll
Query .................................NDNIVDXNFECENRP..gpyefre  245
ident                                             |            
Sbjct drplkcdepilsnrsgdhrgkfkvasfrkkyelRAPVAGTCYQAEWDDyvpklyeql  180
DSSP  lllllllllllllllllllllllhhhhhhhlllLLLLEEEEEEELLLLlhhhhhhhl