Target Selection





Modeling Tools

  • Database of comparative protein structure models : ModBase
  • Comparative modeling web-server : ModWeb
  • Comparative Modelling using multiple templates : M4T
    Multiple Mapping Method : MMM
  • Homology detection by HMM-HMM comparison : HHPRED
  • Protein Structure Prediction : mGenTHREADER

Construct Design Tools

  • Integrated Construct Design Interface: ICDI
  • Protein Structure Prediction : PSIPRED
  • Multiple alignment Editor : Jalview


Model Quality Assesment

  • Model Evaluation server ModEval : ModEval
  • Protein Structure Analysis : ProSA
  • Model Quality Estimation : Qmean

Structure Analysis

  • Evolutionary Trace: ET
  • Identification of Functional Regions in Proteins : ConSurf

Functional Annotation

  • Automated protein structure annotation and publishing : Autopublish
  • Protein Function Annotation : TOPSAN